Consorzio Interuniversitario per lo sviluppo dei Sistemi a Grande Interfase
Center for Colloid and Surface Science

PUBLICATIONS

Here you can find the updated list of all the publications of CSGI members and affilated staff. Please note that the only publications listed here are those published after the affilation of each member. If you are interested in the whole bibliography of CSGI members, including articles and books published before affilation to CSGI, please refer to academic research databases, such as Scopus, Web Of Science, Google Scholar, ect.

You can use the search bar below to filter the publication list.

2024

A Small Guide on How to Mount a Sample in a Light-Sheet Microscope

- Francesco Pampaloni - Lachica E. - Paysan J. - Reynaud E.G.
Light Sheet Fluorescence Microscopy

How to obtain an integrated picture of the molecular networks involved in adaptation to microgravity in different biological systems?

- Willis C.R.G. - Calvaruso M. - Angeloni D. - Baatout S. - Benchoua A. - Bereiter-Hahn J. - Bottai D. - Buchheim J.I. - Carnero-Diaz E. - Castiglioni S. - Cavalieri D. - Ceccarelli G. - Chouker A. - Cialdai F. - Ciofani G. - Coppola G. - Cusella G. - Degl’Innocenti A. - Desaphy J.F. - Frippiat J.P. - Gelinsky M. - Genchi G. - Grano M. - Grimm D. - Guignandon A. - Herranz R. - Hellweg C. - Iorio C.S. - Karapantsios T. - van Loon J. - Lulli M. - Maier J. - Malda J. - Mamaca E. - Morbidelli L. - Osterman A. - Ovsianikov A. - Francesco Pampaloni - Pavezlorie E. - Pereda-Campos V. - Przybyla C. - Rettberg P. - Rizzo A.M. - Robson-Brown K. - Rossi L. - Russo G. - Salvetti A. - Risaliti C. - Santucci D. - Sperl M. - Tabury K. - Tavella S. - Thielemann C. - Willaert R. - Monici M. - Szewczyk N.J.
npj Microgravity

How are cell and tissue structure and function influenced by gravity and what are the gravity perception mechanisms?

- Davis T. - Tabury K. - Zhu S. - Angeloni D. - Baatout S. - Benchoua A. - Bereiter-Hahn J. - Bottai D. - Buchheim J.I. - Calvaruso M. - Carnero-Diaz E. - Castiglioni S. - Cavalieri D. - Ceccarelli G. - Choukér A. - Cialdai F. - Ciofani G. - Coppola G. - Cusella G. - Degl’Innocenti A. - Desaphy J.F. - Frippiat J.P. - Gelinsky M. - Genchi G. - Grano M. - Grimm D. - Guignandon A. - Hahn C. - Hatton J. - Herranz R. - Hellweg C.E. - Iorio C.S. - Karapantsios T. - van Loon J.J.W.A. - Lulli M. - Maier J. - Malda J. - Mamaca E. - Morbidelli L. - van Ombergen A. - Osterman A. - Ovsianikov A. - Francesco Pampaloni - Pavezlorie E. - Pereda-Campos V. - Przybyla C. - Puhl C. - Rettberg P. - Rizzo A.M. - Robson-Brown K. - Rossi L. - Russo G. - Salvetti A. - Santucci D. - Sperl M. - Tavella S. - Thielemann C. - Willaert R. - Szewczyk N. - Monici M.
npj Microgravity

LUBAC-mediated M1 Ub regulates necroptosis by segregating the cellular distribution of active MLKL

- Weinelt N. - Wächtershäuser K.N. - Celik G. - Jeiler B. - Gollin I. - Zein L. - Smith S. - Andrieux G. - Das T. - Roedig J. - Feist L. - Rotter B. - Boerries M. - Francesco Pampaloni - van Wijk S.J.L.
Cell Death and Disease

2023

Light Sheet-Based Laser Patterning Bioprinting Produces Long-Term Viable Full-Thickness Skin Constructs

- Hafa L. - Breideband L. - Ramirez Posada L. - Torras N. - Martinez E. - Stelzer E.H.K. - Francesco Pampaloni
Advanced Materials

How do gravity alterations affect animal and human systems at a cellular/tissue level?

- Cialdai F. - Brown A.M. - Baumann C.W. - Angeloni D. - Baatout S. - Benchoua A. - Bereiter-Hahn J. - Bottai D. - Buchheim J.I. - Calvaruso M. - Carnero-Diaz E. - Castiglioni S. - Cavalieri D. - Ceccarelli G. - Choukér A. - Ciofani G. - Coppola G. - Cusella G. - Degl’Innocenti A. - Desaphy J.F. - Frippiat J.P. - Gelinsky M. - Genchi G. - Grano M. - Grimm D. - Guignandon A. - Hahn C. - Hatton J. - Herranz R. - Hellweg C.E. - Iorio C.S. - Karapantsios T. - van Loon J. - Lulli M. - Maier J. - Malda J. - Mamaca E. - Morbidelli L. - van Ombergen A. - Osterman A. - Ovsianikov A. - Francesco Pampaloni - Pavezlorie E. - Pereda-Campos V. - Przybyla C. - Puhl C. - Rettberg P. - Risaliti C. - Rizzo A.M. - Robson-Brown K. - Rossi L. - Russo G. - Salvetti A. - Santucci D. - Sperl M. - Strollo F. - Tabury K. - Tavella S. - Thielemann C. - Willaert R. - Szewczyk N.J. - Monici M.
npj Microgravity

Distinct and targetable role of calcium-sensing receptor in leukaemia

- Pereira R.S. - Kumar R. - Cais A. - Paulini L. - Kahler A. - Bravo J. - Minciacchi V.R. - Krack T. - Kowarz E. - Zanetti C. - Godavarthy P.S. - Hoeller F. - Llavona P. - Stark T. - Tascher G. - Nowak D. - Meduri E. - Huntly B.J.P. - Münch C. - Francesco Pampaloni - Marschalek R. - Krause D.S.
Nature Communications

2022

Label-Free Imaging Analysis of Patient-Derived Cholangiocarcinoma Organoids after Sorafenib Treatment

- Koch M. - Nickel S. - Lieshout R. - Lissek S.M. - Leskova M. - van der Laan L.J.W. - Verstegen M.M.A. - Christ B. - Francesco Pampaloni
Cells

Upgrading a Consumer Stereolithographic 3D Printer to Produce a Physiologically Relevant Model with Human Liver Cancer Organoids

- Breideband L. - Wächtershäuser K.N. - Hafa L. - Wieland K. - Frangakis A.S. - Stelzer E.H.K. - Francesco Pampaloni
Advanced Materials Technologies

2021

MISpheroID: a knowledgebase and transparency tool for minimum information in spheroid identity

- Peirsman A. - Blondeel E. - Ahmed T. - Anckaert J. - Audenaert D. - Boterberg T. - Buzas K. - Carragher N. - Castellani G. - Castro F. - Dangles-Marie V. - Dawson J. - De Tullio P. - De Vlieghere E. - Dedeyne S. - Depypere H. - Diosdi A. - Dmitriev R.I. - Dolznig H. - Fischer S. - Gespach C. - Goossens V. - Heino J. - Hendrix A. - Horvath P. - Kunz-Schughart L.A. - Maes S. - Mangodt C. - Mestdagh P. - Michlíková S. - Oliveira M.J. - Francesco Pampaloni - Piccinini F. - Pinheiro C. - Rahn J. - Robbins S.M. - Siljamäki E. - Steigemann P. - Sys G. - Takayama S. - Tesei A. - Tulkens J. - Van Waeyenberge M. - Vandesompele J. - Wagemans G. - Weindorfer C. - Yigit N. - Zablowsky N. - Zanoni M. - Blondeel P. - De Wever O.
Nature Methods

Long-term live imaging and multiscale analysis identify heterogeneity and core principles of epithelial organoid morphogenesis

- Hof L. - Moreth T. - Koch M. - Liebisch T. - Kurtz M. - Tarnick J. - Lissek S.M. - Verstegen M.M.A. - van der Laan L.J.W. - Huch M. - Matthäus F. - Stelzer E.H.K. - Francesco Pampaloni
BMC Biology

Accelerating cryoprotectant diffusion kinetics improves cryopreservation of pancreatic islets

- Dolezalova N. - Gruszczyk A. - Barkan K. - Gamble J.A. - Galvin S. - Moreth T. - O’Holleran K. - Mahbubani K.T. - Higgins J.A. - Gribble F.M. - Reimann F. - Surmacki J. - Andrews S. - Casey J.J. - Francesco Pampaloni - Murphy M.P. - Ladds G. - Slater N.K.H. - Saeb-Parsy K.
Scientific Reports

2020

Standardized GMP-compliant scalable production of human pancreas organoids

- Dossena M. - Piras R. - Cherubini A. - Barilani M. - Dugnani E. - Salanitro F. - Moreth T. - Francesco Pampaloni - Piemonti L. - Lazzari L.
Stem Cell Research and Therapy

3D-Cell-Annotator: An open-source active surface tool for single-cell segmentation in 3D microscopy images

- Tasnadi E.A. - Toth T. - Kovacs M. - Diosdi A. - Francesco Pampaloni - Molnar J. - Piccinini F. - Horvath P.
Bioinformatics

p63 uses a switch-like mechanism to set the threshold for induction of apoptosis

- Gebel J. - Tuppi M. - Chaikuad A. - Hötte K. - Schröder M. - Schulz L. - Löhr F. - Gutfreund N. - Finke F. - Henrich E. - Mezhyrova J. - Lehnert R. - Francesco Pampaloni - Hummer G. - Stelzer E.H.K. - Knapp S. - Dötsch V.
Nature Chemical Biology

hFRUIT: An optimized agent for optical clearing of DiI-stained adult human brain tissue

- Hildebrand S. - Schueth A. - Wangenheim K.v. - Mattheyer C. - Francesco Pampaloni - Bratzke H. - Roebroeck A.F. - Galuske R.A.W.
Scientific Reports

Human extrahepatic and intrahepatic cholangiocyte organoids show region-specific differentiation potential and model cystic fibrosis-related bile duct disease

- Verstegen M.M.A. - Roos F.J.M. - Burka K. - Gehart H. - Jager M. - de Wolf M. - Bijvelds M.J.C. - de Jonge H.R. - Ardisasmita A.I. - van Huizen N.A. - Roest H.P. - de Jonge J. - Koch M. - Francesco Pampaloni - Fuchs S.A. - Schene I.F. - Luider T.M. - van der Doef H.P.J. - Bodewes F.A.J.A. - de Kleine R.H.J. - Spee B. - Kremers G.J. - Clevers H. - IJzermans J.N.M. - Cuppen E. - van der Laan L.J.W.
Scientific Reports

2019

Ultra-thin fluorocarbon foils optimise multiscale imaging of three-dimensional native and optically cleared specimens

- Hötte K. - Koch M. - Hof L. - Tuppi M. - Moreth T. - Verstegen M.M.A. - van der Laan L.J.W. - Stelzer E.H.K. - Francesco Pampaloni
Scientific Reports

2017

Three-dimensional live imaging of filamentous fungi with light sheet-based fluorescence microscopy (LSFM)

- Francesco Pampaloni - Knuppertz L. - Hamann A. - Osiewacz H.D. - Stelzer E.H.K.
Methods in Molecular Biology

AMP-Activated Protein Kinase α2 in Neutrophils Regulates Vascular Repair via Hypoxia-Inducible Factor-1α and a Network of Proteins Affecting Metabolism and Apoptosis

- Abdel Malik R. - Zippel N. - Frömel T. - Heidler J. - Zukunft S. - Walzog B. - Ansari N. - Francesco Pampaloni - Wingert S. - Rieger M.A. - Wittig I. - Fisslthaler B. - Fleming I.
Circulation Research

Linear ubiquitination of cytosolic Salmonella Typhimurium activates NF-κB and restricts bacterial proliferation

- Van Wijk S.J.L. - Fricke F. - Herhaus L. - Gupta J. - Hötte K. - Francesco Pampaloni - Grumati P. - Kaulich M. - Sou Y.S. - Komatsu M. - Greten F.R. - Fulda S. - Heilemann M. - Dikic I.
Nature Microbiology

2015

2014

Quantifying the autophagy-triggering effects of drugs in cell spheroids with live fluorescence microscopy

- Ansari N. - Hardung S. - Hötte K. - Rakel S. - Antonietti P. - Kögel D. - Stelzer E.H.K. - Francesco Pampaloni
Methods in Molecular Biology

3D high-content screening for the identification of compounds that target cells in dormant tumor spheroid regions

- Wenzel C. - Riefke B. - Gründemann S. - Krebs A. - Christian S. - Prinz F. - Osterland M. - Golfier S. - Räse S. - Ansari N. - Esner M. - Bickle M. - Francesco Pampaloni - Mattheyer C. - Stelzer E.H. - Parczyk K. - Prechtl S. - Steigemann P.
Experimental Cell Research

Getting to the core

- Wenzel C. - Riefke B. - Gründemann S. - Krebs A. - Christian S. - Prinz F. - Osterland M. - Golfier S. - Räse S. - Ansari N. - Esner M. - Bickle M. - Francesco Pampaloni - Mattheyer C. - Stelzer E.H. - Parczyk K. - Prechtl S. - Steigemann P.
Assay and Drug Development Technologies

2013

Recent advances in 2D and 3D in vitro systems using primary hepatocytes, alternative hepatocyte sources and non-parenchymal liver cells and their use in investigating mechanisms of hepatotoxicity, cell signaling and ADME

- Godoy P. - Hewitt N.J. - Albrecht U. - Andersen M.E. - Ansari N. - Bhattacharya S. - Bode J.G. - Bolleyn J. - Borner C. - Böttger J. - Braeuning A. - Budinsky R.A. - Burkhardt B. - Cameron N.R. - Camussi G. - Cho C.S. - Choi Y.J. - Craig Rowlands J. - Dahmen U. - Damm G. - Dirsch O. - Donato M.T. - Dong J. - Dooley S. - Drasdo D. - Eakins R. - Ferreira K.S. - Fonsato V. - Fraczek J. - Gebhardt R. - Gibson A. - Glanemann M. - Goldring C.E.P. - Gómez-Lechón M.J. - Groothuis G.M.M. - Gustavsson L. - Guyot C. - Hallifax D. - Hammad S. - Hayward A. - Häussinger D. - Hellerbrand C. - Hewitt P. - Hoehme S. - Holzhütter H.G. - Houston J.B. - Hrach J. - Ito K. - Jaeschke H. - Keitel V. - Kelm J.M. - Kevin Park B. - Kordes C. - Kullak-Ublick G.A. - Lecluyse E.L. - Lu P. - Luebke-Wheeler J. - Lutz A. - Maltman D.J. - Matz-Soja M. - McMullen P. - Merfort I. - Messner S. - Meyer C. - Mwinyi J. - Naisbitt D.J. - Nussler A.K. - Olinga P. - Francesco Pampaloni - Pi J. - Pluta L. - Przyborski S.A. - Ramachandran A. - Rogiers V. - Rowe C. - Schelcher C. - Schmich K. - Schwarz M. - Singh B. - Stelzer E.H.K. - Stieger B. - Stöber R. - Sugiyama Y. - Tetta C. - Thasler W.E. - Vanhaecke T. - Vinken M. - Weiss T.S. - Widera A. - Woods C.G. - Xu J.J. - Yarborough K.M. - Hengstler J.G.
Archives of Toxicology

2012

Fluorescence-Based Sensors to Monitor Localization and Functions of Linear and K63-Linked Ubiquitin Chains in Cells

- van Wijk S.J.L. - Fiskin E. - Putyrski M. - Francesco Pampaloni - Hou J. - Wild P. - Kensche T. - Grecco H.E. - Bastiaens P. - Dikic I.
Molecular Cell

2011

Light sheet-based fluorescence microscopy (LSFM) reduces phototoxic effects and provides new means for the modern life sciences

- Francesco Pampaloni - Ansari N. - Girard P. - Stelzer E.H.K.
Progress in Biomedical Optics and Imaging - Proceedings of SPIE

2010

2009

Three-dimensional cell cultures in toxicology

- Francesco Pampaloni - Stelzer E.H.K.
Biotechnology and Genetic Engineering Reviews

Three-dimensional tissue models for drug discovery and toxicology

- Francesco Pampaloni - Stelzer E.H.K. - Masotti A.
Recent Patents on Biotechnology

2008

Microtubule dynamics depart from the wormlike chain model

- Taute K.M. - Francesco Pampaloni - Frey E. - Florin E.L.
Physical Review Letters